Link Japanese

Yuki Sudo

2014

Authors：

Tsukamoto, T., Demura, M., & Sudo, Y.

Title：

Irreversible Trimer to Monomer Transition of Thermophilic Rhodopsin upon Thermal Stimulation

Journal：

J. Phys. Chem. B 118, 12383-12394 (2014)

2014

Authors：

Yomoda, H., Makino, Y., Tomonaga, Y., Hidaka, T., *Kawamura, I., Okitsu, T., Wada, A., Sudo, Y., & Naito, A.

Title：

Color discriminating retinal configurations of sensory rhodopsin I by photo-irradiation solid state NMR spectroscopy

Journal：

Angew. Chem. Int. Ed. 53, 6960-6964 (2014)

2014

Authors：

Sudo, Y., Mizuno, M., Wei, Z., Takeuchi, S., Tahara, T., & Mizutani, Y.

Title：

The early steps in the photocycle of a photosensor protein sensory rhodopsin I from Salinibacter ruber

Journal：

J. Phys. Chem. B 118, 1510-1518 (2014)

2013

Authors：

Tsukamoto, T., Inoue, K., Kandori, H., & Sudo, Y.

Title：

Thermal and spectroscopic characterization of a proton pumping rhodopsin from an extreme thermophile

Journal：

J. Biol. Chem. 288, 21581-21592 (2013)【Faculty of 1000 Biology “Recommended” 】

2013

Authors：

Sudo, Y., Okazaki, A., Ono, H., Yagasaki, J., Sugo, S., Kamiya, M., Reissig, L., Inoue, K., Ihara, K., Kandori, H., Takagi, S., & Hayashi, S.

Title：

A blue-shifted light-driven proton pump for neural silencing

Journal：

J. Biol. Chem. 288, 20624-20632 (2013)

2013

Authors：

Mori, A., Yagasaki, J., Homma, M., Reissig, L., & Sudo, Y.

Title：

Investigation of the chromophore binding cavity in the 11-cis acceptable microbial rhodopsin MR

Journal：

Chem. Phys. 419, 23-29 (2013)

2013

Authors：

Furutani, Y., Okitsu, T., Reissig, L., Mizuno, M., Homma, M., Wada, A., Mizutani, Y., and *Sudo, Y.

Title：

Large spectral change due to amide modes of a β-sheet upon the formation of an early photointermediate of middle rhodopsin

Journal：

J. Phys. Chem. B 117, 3449-3458 (2013)

2012

Authors：

Reissig, L., Iwata, T., Kikukawa, T., Demura, M., Kamo, N., Kandori, H., and *Sudo, Y.

Title：

The influence of halide binding on the hydrogen bonding network in the active site of Salinibacter sensory rhodopsin I

Journal：

Biochemistry 51, 8802-8813 (2012)

2012

Authors：

Irieda, H., Morita, T., Maki, K., Homma, M., Aiba, H., and *Sudo, Y.

Title：

Photo-induced regulation of the chromatic adaptive gene expression by Anabaena sensory rhodopsin

Journal：

J. Biol. Chem. 287, 32485-32493 (2012)

2012

Authors：

Inoue, K., Reissig, L., Sakai, M., Kobayashi, S., Homma, M., Fujii, M., Kandori, H., and *Sudo, Y.

Title：

Absorption spectra and photochemical reactions in a unique photoactive protein, middle rhodopsin MR

Journal：

J. Phys. Chem. B 116, 5888-5899 (2012)

2012

Authors：

Okazaki, A., Sudo, Y., and *Takagi, S.

Title：

Optical silencing of C. elegans cells with arch proton pump

Journal：

PLoS One 7, e35370 (2012)

2011

Authors：

Tomonaga, Y., Hidaka, T,, Kawamura, I,, Nishio, T,, Ohsawa, K,, Okitsu, T,, Wada, A,, Sudo, Y,, Kamo, N,, Ramamoorthy, A,, and *Naito, A.

Title：

An active photoreceptor intermediate revealed by in situ photoirradiated solid-state NMR spectroscopy

Journal：

Biophysical Journal, Vol.101 No10 L50-52 (2011)

2011

Authors：

Sudo, Y., Tanaka, R., Kobayashi, T., Kamo, N., Kohno, T., Kojima, C.

Title：

Functional expression of a two-transmembrane HtrII protein using cell-free synthesis

Journal：

BIophysics 7, 51-58(2011)

2011

Authors：

Irieda, H., Reissig, L., Kawanabe, A., Homma, M., Kandori, H., *Sudo, Y.

Title：

Structural characteristics around the b-ionone ring of the retinal chromophore in Salinibacter sensory rhodopsin I

Journal：

Biochemistry 50, 4912-4922(2011)

2011

Authors：

*Inoue, K., Sudo, Y., Homma, M., and Kandori, H.

Title：

Spectrally silent intermediates during the photochemical reactions of Salinibacter sensory rhodopsin I

Journal：

Journal of Physical Chemistry B, Vol.115, No15 4500-4508 (2011)

2011

Authors：

Mizuno, M., Sudo, Y., Homma, M., and *Mizutani, Y.

Title：

Direct observation of the structural change of Tyr174 in the primary reactions sensory rhodopsin II

Journal：

Biochemistry, Vol.50 No.15 3170-3180 (2011)

2011

Authors：

*Sudo, Y., Yuasa, Y., Shibata, J., Suzuki, D., and Homma, M.

Title：

Spectral tuning in sensory rhodopsin I from Salinibacter ruber

Journal：

Journal of Biological Chemistry, Vol.286 No.13 11328-11336 (2011)

2011

Authors：

*Sudo, Y., Ihara, K., Kobayashi, S., Suzuki, D., Irieda, H., Kikukawa, T., Kandori, H., and Homma, M.

Title：

A microbial rhodopsin with a unique retinal composition shows both sensory rhodopsin II and bacteriorhodopsin-like properties

Journal：

Journal of Biological Chemistry, Vol.286 No.8 5967-5976 (2011)

2010

Authors：

*Kandori, H., Sudo, Y., and Furutani, Y.

Title：

Protein-protein interaction changes in an archaeal light-signal transduction

Journal：

Journal of Biomedicine and Biotechnology 2010:424760 (14 pages). (2010)

2010

Authors：

Suzuki, D., Irieda, H., Homma, M., Kawagishi, I. and *Sudo, Y.

Title：

Phototactic and chemotactic signal transduction by transmembrane receptors and transducers in microorganisms

Journal：

Sensors, Vol.10 No.4 4010-4039 (2010)

2010

Authors：

Yagasaki, J., Suzuki, D., Ihara, K., Inoue, K., Kikukawa, T., Sakai, M., Fujii, M., Homma, M., Kandori, H., and Sudo, Y.

Title：

Spectroscopic studies of a sensory rhodopsin I homologue from the archaeon Haloarcula vallismortis

Journal：

Biochemistry, Vol.49 No.6 1183-1190 (2010)

2009

Authors：

Sudo, Y., Kitade, Y., Furutani, Y., Kojima, M., Kojima, S., Homma, M., and *Kandori, H.

Title：

Interaction between Na(+) ion and carboxylates of the PomA-PomB stator unit studied by ATR-FTIR spectroscopy

Journal：

Biochemistry, Vol.48 No.49 11699-11705 (2009)

2009

Authors：

*Sudo, Y., Okada, A., Suzuki, D., Inoue, K., Irieda, H., Sakai, M., Fujii, M., Furutani, Y., Kandori, H., and Homma, M.

Title：

Characterization of a signaling complex composed of sensory rhodopsin I and its cognate transducer protein from the eubacterium Salinibacter ruber

Journal：

Biochemistry, Vol.48 No.42 10136-10145 (2009)

2009

Authors：

Kojima, S., *Imada, K., Sakuma, M., Sudo, Y., Kojima, C., Minamino, T., *Homma, M., and *Nammba, K.

Title：

Stator assembly and activation mechanism of the flagellar motor by the periplasmic region of MotB

Journal：

Molecular Microbiology Vol.73 No.4 710-718 (2009)

2009

Authors：

Suzuki, D., Furutani, Y., Inoue, K., Kikukawa, T., Sakai, M., Fujii, M., Kandori, H., Homma, M. and *Sudo, Y.

Title：

Effects of chloride ion binding on the photochemical properties of Salinibacter sensory rhodopsin I

Journal：

Journal of Molecular Biology, Vol.392 No.1 48-62（2009） 【朝日新聞7/15, 科学新聞7/24, 中日新聞7/19, 時事通信7/14, 共同通信7/18】

2009

Authors：

*Sudo, Y., Terashima, H., Abe-Yoshizumi, R., Kojima, S. and Homma, M.

Title：

Comparative study of the ion flux pathway in stator units of proton- and sodium-driven flagellar motors

Journal：

Biophysics, Vol.5 45-52 (2009)

2008

Authors：

Suzuki, D., Sudo, Y., Furutani, Y., Takahashi, H., Homma, M. and *Kandori, H.

Title：

Structural changes of Salinibacter sensory rhodopsin I upon formation of K and M intermediates

Journal：

Biochemistry, Vol.47 No.48 12750-12759 (2008)

2008

Authors：

Furutani, Y., Sudo, Y. and *Kandori, H.

Title：

FTIR studies of protein-protein interaction changes between pharaonis phoborhodopsin and its cognate transducer protein

Journal：

Current Topics in Biochemical Research Vo.10 63-77 (2008)

2008

Authors：

Suzuki, D., Kitajima-Ihara, T., Furutani, Y., Ihara, K., Kandori, H., Homma, M. and *Sudo, Y.

Title：

A photochromic photoreceptor from a eubacterium

Journal：

Integrative and Communicative Biology, Vol.1 No.2 150-152.